STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flgMAnti-sigma factor FlgM; Pfam match to PF04316.11 FlgM. (66 aa)    
Predicted Functional Partners:
flgN
Flagellar biosynthesis protein FlgN; Pfam match to PF05130.10 FlgN.
  
    0.698
flgK
Flagellar hook-associated protein; Pfam match to PF06429.11 Flg_bbr_C; Belongs to the flagella basal body rod proteins family.
  
    0.656
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
       0.645
ARE79838.1
Hypothetical protein, possible flagellar protein FlgJ; Pfam match to PF10135.7 Rod-binding.
       0.645
ARE79842.1
Hypothetical protein (DUF2400 domain); Pfam match to PF09674.8 DUF2400.
       0.567
ARE79843.1
Putative membrane protein, TauE/SafE family permease; Pfam match to PF01925.17 TauE.
       0.567
Your Current Organism:
Campylobacter helveticus
NCBI taxonomy Id: 28898
Other names: ATCC 51209, C. helveticus, CCUG 30682, CIP 104877, LMG 12638, LMG 19528, LMG:12638, LMG:19528, NCTC 12470
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