STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARE80061.1Beta-barrel assembly machinery complex, BamD/YfiO lipoprotein; Pfam match to PF13525.4 YfiO. (215 aa)    
Predicted Functional Partners:
bamA
Beta-barrel assembly machinery complex, BamA/YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
 
 0.947
lptD
Putative lipooligosaccharide transport system, OM component (LptD family); Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
 
  
 0.805
ybgF
Tol-Pal system protein YbgF.
 
   
 0.799
tolB
Tol-Pal system translocation protein TolB.
  
   
 0.798
ARE79705.1
Hypothetical protein, possible nucleoside phosphorylase.
 
     0.781
ctsW
Transformation system, predicted amidophosphoribosyltransferase CtsW.
  
   
 0.777
atpF-2
ATP synthase, F0 complex, b subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.774
ftsX
Cell division protein FtsX; Pfam match to PF02687.19 FtsX.
  
     0.774
ARE80487.1
DHH-type phosphohydrolase.
  
    0.774
ARE81293.1
Hypothetical protein (DUF507 domain); Pfam match to PF04368.11 DUF507.
  
     0.773
Your Current Organism:
Campylobacter helveticus
NCBI taxonomy Id: 28898
Other names: ATCC 51209, C. helveticus, CCUG 30682, CIP 104877, LMG 12638, LMG 19528, LMG:12638, LMG:19528, NCTC 12470
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.