STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARE80100.1Hypothetical protein. (461 aa)    
Predicted Functional Partners:
ftsK
DNA segregation ATPase FtsK/SpoIIIE; Pfam matches to PF01580.16 FtsK_SpoIIIE, and to PF09397.8 Ftsk_gamma, and to PF01580.16 FtsK_SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family.
    
 
 0.807
tatA
Twin arginine translocation system, TatA/E family protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
  
    0.803
gmk
Deoxyguanylate kinase / guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
       0.800
fliK
Flagellar hook-length control protein; Pfam match to PF02120.14 Flg_hook.
 
   
 0.797
flgL
Flagellar hook-associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 
 0.793
argS
arginyl-tRNA synthetase; Pfam matches to PF00750.17 tRNA-synt_1d, and to PF05746.13 DALR_1, and to PF03485.14 Arg_tRNA_synt_N.
       0.790
ARE80637.1
Hypothetical protein, putative thioredoxin.
    
   0.781
ARE79938.1
Hypothetical protein (PDZ domain); Pfam match to PF13180.4 PDZ_2.
  
  
 0.775
ARE80187.1
Hypothetical protein (C-terminal FliK domain); Pfam match to PF02120.14 Flg_hook.
  
     0.767
fliH
Flagellar export apparatus, flagellar assembly protein FliH; Pfam match to PF02108.14 FliH.
 
     0.764
Your Current Organism:
Campylobacter helveticus
NCBI taxonomy Id: 28898
Other names: ATCC 51209, C. helveticus, CCUG 30682, CIP 104877, LMG 12638, LMG 19528, LMG:12638, LMG:19528, NCTC 12470
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