STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARE80105.1Hypothetical membrane protein (DUF3815 domain); Pfam match to PF12821.5 ThrE_2. (167 aa)    
Predicted Functional Partners:
ARE80106.1
Hypothetical membrane protein (DUF1212 domain); Pfam match to PF06738.10 ThrE.
 
  
 0.977
ARE80107.1
Putative membrane protein, DedA family, type II (SNARE domain); Pfam match to PF09335.9 SNARE_assoc.
       0.786
ppiB
Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
       0.786
maf5
Motility accessory factor; Pfam match to PF01973.16 MAF_flag10.
       0.773
pseD
Putative Pse5Am7Ac transferase; Pfam match to PF01973.16 MAF_flag10.
       0.773
ARE80104.1
Hypothetical protein, putative transcriptional regulator (zinc finger domain); Pfam match to PF13453.4 zf-TFIIB.
     
 0.642
ARE80111.1
YebC/PmpR family DNA-binding regulatory protein; Pfam match to PF01709.18 Transcrip_reg.
       0.506
fdhT
Formate dehydrogenase biogenesis protein FdhT; Pfam matches to PF04143.12 Sulf_transp, and to PF04143.12 Sulf_transp.
 
     0.443
fdhU
Formate dehydrogenase biogenesis protein FdhU; Pfam match to PF01206.15 TusA; Belongs to the sulfur carrier protein TusA family.
 
     0.423
ARE80872.1
Hypothetical periplasmic protein (DUF2874 domains); Pfam match to PF11396.6 PepSY_like.
  
     0.415
Your Current Organism:
Campylobacter helveticus
NCBI taxonomy Id: 28898
Other names: ATCC 51209, C. helveticus, CCUG 30682, CIP 104877, LMG 12638, LMG 19528, LMG:12638, LMG:19528, NCTC 12470
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.