STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARE80194.1Hypothetical protein. (573 aa)    
Predicted Functional Partners:
ARE80191.1
Hypothetical protein.
      0.966
ARE80192.1
Fic/DOC family protein; Pfam match to PF02661.16 Fic.
       0.653
ARE80193.1
Hypothetical protein.
       0.642
ARE79694.1
Adenine-specific DNA methyltransferase; Pfam match to PF02086.13 MethyltransfD12.
  
     0.540
npdA
NAD-dependent protein deacetylase, SIR2 family; Pfam match to PF02146.15 SIR2.
   
    0.530
mqnC
Dehypoxanthinylfutalosine cyclase; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).
       0.529
ARE80196.1
Peptidase, M16 family; Pfam matches to PF05193.19 Peptidase_M16_C, and to PF00675.18 Peptidase_M16.
       0.529
recG
ATP-dependent DNA helicase; Pfam matches to PF00270.27 DEAD, and to PF00271.29 Helicase_C.
       0.529
ARE80029.1
Adenine-specific DNA methyltransferase; Pfam match to PF02086.13 MethyltransfD12.
  
     0.518
ARE79912.1
Putative restriction endonuclease-replacing protein HrgA; Pfam match to PF05066.11 HARE-HTH.
  
     0.516
Your Current Organism:
Campylobacter helveticus
NCBI taxonomy Id: 28898
Other names: ATCC 51209, C. helveticus, CCUG 30682, CIP 104877, LMG 12638, LMG 19528, LMG:12638, LMG:19528, NCTC 12470
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.