Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARE80421.1 | ARE80423.1 | CHELV3228_0826 | CHELV3228_0828 | Hypothetical protein. | Lysophospholipid acyltransferase family protein (DUF374 domain); Pfam match to PF04028.11 DUF374. | 0.800 |
ARE80421.1 | ARE80424.1 | CHELV3228_0826 | CHELV3228_0829 | Hypothetical protein. | Hypothetical protein. | 0.800 |
ARE80421.1 | ARE80425.1 | CHELV3228_0826 | CHELV3228_0830 | Hypothetical protein. | Hypothetical protein. | 0.800 |
ARE80421.1 | ARE80426.1 | CHELV3228_0826 | CHELV3228_0831 | Hypothetical protein. | Hypothetical protein. | 0.800 |
ARE80421.1 | miaB | CHELV3228_0826 | CHELV3228_0827 | Hypothetical protein. | Isopentenyl-adenosine A37 tRNA methylthiolase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.800 |
ARE80421.1 | nusA | CHELV3228_0826 | CHELV3228_0825 | Hypothetical protein. | Transcription termination factor; Participates in both transcription termination and antitermination. | 0.633 |
ARE80423.1 | ARE80421.1 | CHELV3228_0828 | CHELV3228_0826 | Lysophospholipid acyltransferase family protein (DUF374 domain); Pfam match to PF04028.11 DUF374. | Hypothetical protein. | 0.800 |
ARE80423.1 | ARE80424.1 | CHELV3228_0828 | CHELV3228_0829 | Lysophospholipid acyltransferase family protein (DUF374 domain); Pfam match to PF04028.11 DUF374. | Hypothetical protein. | 0.800 |
ARE80423.1 | ARE80425.1 | CHELV3228_0828 | CHELV3228_0830 | Lysophospholipid acyltransferase family protein (DUF374 domain); Pfam match to PF04028.11 DUF374. | Hypothetical protein. | 0.800 |
ARE80423.1 | ARE80426.1 | CHELV3228_0828 | CHELV3228_0831 | Lysophospholipid acyltransferase family protein (DUF374 domain); Pfam match to PF04028.11 DUF374. | Hypothetical protein. | 0.800 |
ARE80423.1 | miaB | CHELV3228_0828 | CHELV3228_0827 | Lysophospholipid acyltransferase family protein (DUF374 domain); Pfam match to PF04028.11 DUF374. | Isopentenyl-adenosine A37 tRNA methylthiolase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.800 |
ARE80423.1 | nusA | CHELV3228_0828 | CHELV3228_0825 | Lysophospholipid acyltransferase family protein (DUF374 domain); Pfam match to PF04028.11 DUF374. | Transcription termination factor; Participates in both transcription termination and antitermination. | 0.595 |
ARE80424.1 | ARE80421.1 | CHELV3228_0829 | CHELV3228_0826 | Hypothetical protein. | Hypothetical protein. | 0.800 |
ARE80424.1 | ARE80423.1 | CHELV3228_0829 | CHELV3228_0828 | Hypothetical protein. | Lysophospholipid acyltransferase family protein (DUF374 domain); Pfam match to PF04028.11 DUF374. | 0.800 |
ARE80424.1 | ARE80425.1 | CHELV3228_0829 | CHELV3228_0830 | Hypothetical protein. | Hypothetical protein. | 0.800 |
ARE80424.1 | ARE80426.1 | CHELV3228_0829 | CHELV3228_0831 | Hypothetical protein. | Hypothetical protein. | 0.800 |
ARE80424.1 | miaB | CHELV3228_0829 | CHELV3228_0827 | Hypothetical protein. | Isopentenyl-adenosine A37 tRNA methylthiolase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.800 |
ARE80424.1 | nusA | CHELV3228_0829 | CHELV3228_0825 | Hypothetical protein. | Transcription termination factor; Participates in both transcription termination and antitermination. | 0.595 |
ARE80425.1 | ARE80421.1 | CHELV3228_0830 | CHELV3228_0826 | Hypothetical protein. | Hypothetical protein. | 0.800 |
ARE80425.1 | ARE80423.1 | CHELV3228_0830 | CHELV3228_0828 | Hypothetical protein. | Lysophospholipid acyltransferase family protein (DUF374 domain); Pfam match to PF04028.11 DUF374. | 0.800 |
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