node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplD | rpsB | CHELV3228_0040 | CHELV3228_0468 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Pfam match to PF00318.18 Ribosomal_S2; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
rplD | rpsC | CHELV3228_0040 | CHELV3228_0045 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
rplD | rpsE | CHELV3228_0040 | CHELV3228_0056 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.999 |
rplD | rpsH | CHELV3228_0040 | CHELV3228_0053 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.999 |
rplD | rpsI | CHELV3228_0040 | CHELV3228_1716 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Pfam match to PF00380.17 Ribosomal_S9; Belongs to the universal ribosomal protein uS9 family. | 0.992 |
rplD | rpsJ | CHELV3228_0040 | CHELV3228_0038 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.999 |
rplD | rpsN | CHELV3228_0040 | CHELV3228_0052 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.999 |
rplD | rpsO | CHELV3228_0040 | CHELV3228_0898 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
rplD | rpsQ | CHELV3228_0040 | CHELV3228_0048 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.999 |
rplD | rpsS | CHELV3228_0040 | CHELV3228_0043 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.999 |
rpsB | rplD | CHELV3228_0468 | CHELV3228_0040 | Pfam match to PF00318.18 Ribosomal_S2; Belongs to the universal ribosomal protein uS2 family. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.999 |
rpsB | rpsC | CHELV3228_0468 | CHELV3228_0045 | Pfam match to PF00318.18 Ribosomal_S2; Belongs to the universal ribosomal protein uS2 family. | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
rpsB | rpsE | CHELV3228_0468 | CHELV3228_0056 | Pfam match to PF00318.18 Ribosomal_S2; Belongs to the universal ribosomal protein uS2 family. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.998 |
rpsB | rpsH | CHELV3228_0468 | CHELV3228_0053 | Pfam match to PF00318.18 Ribosomal_S2; Belongs to the universal ribosomal protein uS2 family. | 30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.999 |
rpsB | rpsI | CHELV3228_0468 | CHELV3228_1716 | Pfam match to PF00318.18 Ribosomal_S2; Belongs to the universal ribosomal protein uS2 family. | Pfam match to PF00380.17 Ribosomal_S9; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
rpsB | rpsJ | CHELV3228_0468 | CHELV3228_0038 | Pfam match to PF00318.18 Ribosomal_S2; Belongs to the universal ribosomal protein uS2 family. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.998 |
rpsB | rpsN | CHELV3228_0468 | CHELV3228_0052 | Pfam match to PF00318.18 Ribosomal_S2; Belongs to the universal ribosomal protein uS2 family. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.998 |
rpsB | rpsO | CHELV3228_0468 | CHELV3228_0898 | Pfam match to PF00318.18 Ribosomal_S2; Belongs to the universal ribosomal protein uS2 family. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
rpsB | rpsQ | CHELV3228_0468 | CHELV3228_0048 | Pfam match to PF00318.18 Ribosomal_S2; Belongs to the universal ribosomal protein uS2 family. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.998 |
rpsB | rpsS | CHELV3228_0468 | CHELV3228_0043 | Pfam match to PF00318.18 Ribosomal_S2; Belongs to the universal ribosomal protein uS2 family. | 30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.998 |