STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARE80789.1Hypothetical protein. (146 aa)    
Predicted Functional Partners:
ARE80788.1
Copper-binding protein (DUF461 domain); Pfam match to PF04314.11 PCuAC.
  
   0.822
ARE80790.1
Cytochrome oxidase biogenesis protein, Sco1/SenC/PrrC family; Pfam match to PF02630.12 SCO1-SenC.
  
  
 0.806
ccoN
Cytochrome c oxidase CcoNOPQ, cbb3-type, subunit I; Pfam match to PF00115.18 COX1; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.764
ccoP
Cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.741
cccE
Cytochrome c.
  
 
 0.625
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.588
pgp
Peptidoglycan LD-carboxypeptidase; Pfam match to PF03734.12 YkuD.
       0.588
trmL
rRNA methylase, SpoU family; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.
       0.544
ccoO
Cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit II; Pfam match to PF02433.13 FixO.
  
 
 0.521
Your Current Organism:
Campylobacter helveticus
NCBI taxonomy Id: 28898
Other names: ATCC 51209, C. helveticus, CCUG 30682, CIP 104877, LMG 12638, LMG 19528, LMG:12638, LMG:19528, NCTC 12470
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.