Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARE81170.1 | ARE81172.1 | CHELV3228_1604 | CHELV3228_1606 | DNA methyltransferase; Pfam match to PF01555.16 N6_N4_Mtase; Belongs to the N(4)/N(6)-methyltransferase family. | Putative membrane protein, putative permease (EamA domain), type 1; Pfam match to PF00892.18 EamA. | 0.552 |
ARE81170.1 | engA | CHELV3228_1604 | CHELV3228_1605 | DNA methyltransferase; Pfam match to PF01555.16 N6_N4_Mtase; Belongs to the N(4)/N(6)-methyltransferase family. | GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.773 |
ARE81172.1 | ARE81170.1 | CHELV3228_1606 | CHELV3228_1604 | Putative membrane protein, putative permease (EamA domain), type 1; Pfam match to PF00892.18 EamA. | DNA methyltransferase; Pfam match to PF01555.16 N6_N4_Mtase; Belongs to the N(4)/N(6)-methyltransferase family. | 0.552 |
ARE81172.1 | ARE81173.1 | CHELV3228_1606 | CHELV3228_1607 | Putative membrane protein, putative permease (EamA domain), type 1; Pfam match to PF00892.18 EamA. | Hypothetical protein. | 0.511 |
ARE81172.1 | amiA | CHELV3228_1606 | CHELV3228_0503 | Putative membrane protein, putative permease (EamA domain), type 1; Pfam match to PF00892.18 EamA. | Pfam match to PF01520.16 Amidase_3. | 0.491 |
ARE81172.1 | engA | CHELV3228_1606 | CHELV3228_1605 | Putative membrane protein, putative permease (EamA domain), type 1; Pfam match to PF00892.18 EamA. | GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.602 |
ARE81173.1 | ARE81172.1 | CHELV3228_1607 | CHELV3228_1606 | Hypothetical protein. | Putative membrane protein, putative permease (EamA domain), type 1; Pfam match to PF00892.18 EamA. | 0.511 |
amiA | ARE81172.1 | CHELV3228_0503 | CHELV3228_1606 | Pfam match to PF01520.16 Amidase_3. | Putative membrane protein, putative permease (EamA domain), type 1; Pfam match to PF00892.18 EamA. | 0.491 |
engA | ARE81170.1 | CHELV3228_1605 | CHELV3228_1604 | GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | DNA methyltransferase; Pfam match to PF01555.16 N6_N4_Mtase; Belongs to the N(4)/N(6)-methyltransferase family. | 0.773 |
engA | ARE81172.1 | CHELV3228_1605 | CHELV3228_1606 | GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | Putative membrane protein, putative permease (EamA domain), type 1; Pfam match to PF00892.18 EamA. | 0.602 |