Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARE81221.1 | ARE81222.1 | CHELV3228_1657 | CHELV3228_1658 | N-acetyl sugar amidotransferase. | SAM-dependent methyltransferase; Pfam match to PF13649.4 Methyltransf_25. | 0.636 |
ARE81221.1 | ARE81223.1 | CHELV3228_1657 | CHELV3228_1659 | N-acetyl sugar amidotransferase. | SAM-dependent methyltransferase; Pfam match to PF13847.4 Methyltransf_31. | 0.643 |
ARE81221.1 | gatB | CHELV3228_1657 | CHELV3228_1660 | N-acetyl sugar amidotransferase. | Glu-tRNA(Gln) amidotransferase, subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.458 |
ARE81222.1 | ARE81221.1 | CHELV3228_1658 | CHELV3228_1657 | SAM-dependent methyltransferase; Pfam match to PF13649.4 Methyltransf_25. | N-acetyl sugar amidotransferase. | 0.636 |
ARE81222.1 | ARE81223.1 | CHELV3228_1658 | CHELV3228_1659 | SAM-dependent methyltransferase; Pfam match to PF13649.4 Methyltransf_25. | SAM-dependent methyltransferase; Pfam match to PF13847.4 Methyltransf_31. | 0.778 |
ARE81222.1 | gatB | CHELV3228_1658 | CHELV3228_1660 | SAM-dependent methyltransferase; Pfam match to PF13649.4 Methyltransf_25. | Glu-tRNA(Gln) amidotransferase, subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.546 |
ARE81223.1 | ARE81221.1 | CHELV3228_1659 | CHELV3228_1657 | SAM-dependent methyltransferase; Pfam match to PF13847.4 Methyltransf_31. | N-acetyl sugar amidotransferase. | 0.643 |
ARE81223.1 | ARE81222.1 | CHELV3228_1659 | CHELV3228_1658 | SAM-dependent methyltransferase; Pfam match to PF13847.4 Methyltransf_31. | SAM-dependent methyltransferase; Pfam match to PF13649.4 Methyltransf_25. | 0.778 |
ARE81223.1 | gatB | CHELV3228_1659 | CHELV3228_1660 | SAM-dependent methyltransferase; Pfam match to PF13847.4 Methyltransf_31. | Glu-tRNA(Gln) amidotransferase, subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.571 |
gatB | ARE81221.1 | CHELV3228_1660 | CHELV3228_1657 | Glu-tRNA(Gln) amidotransferase, subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | N-acetyl sugar amidotransferase. | 0.458 |
gatB | ARE81222.1 | CHELV3228_1660 | CHELV3228_1658 | Glu-tRNA(Gln) amidotransferase, subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | SAM-dependent methyltransferase; Pfam match to PF13649.4 Methyltransf_25. | 0.546 |
gatB | ARE81223.1 | CHELV3228_1660 | CHELV3228_1659 | Glu-tRNA(Gln) amidotransferase, subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | SAM-dependent methyltransferase; Pfam match to PF13847.4 Methyltransf_31. | 0.571 |