STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARE81276.1DNA methyltransferase; Pfam matches to PF13651.4 EcoRI_methylase, and to PF13651.4 EcoRI_methylase, and to PF10544.7 T5orf172. (426 aa)    
Predicted Functional Partners:
addB
Exonuclease V, helicase AddB; Pfam match to PF12705.5 PDDEXK_1.
  
    0.823
ARE80427.1
Putative endonuclease (DUF262 domain); Pfam matches to PF01844.21 HNH, and to PF03235.12 DUF262.
 
  
 0.813
addA
Exonuclease V, helicase AddA; Pfam matches to PF00580.19 UvrD-helicase, and to PF13361.4 UvrD_C, and to PF13361.4 UvrD_C, and to PF12705.5 PDDEXK_1; Belongs to the helicase family. UvrD subfamily.
  
    0.786
ARE81272.1
Putative membrane protein.
       0.773
ARE81273.1
Putative cytochrome c oxidase-associated protein CcoH.
       0.773
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
       0.563
rpsI
Pfam match to PF00380.17 Ribosomal_S9; Belongs to the universal ribosomal protein uS9 family.
       0.563
ccoO
Cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit II; Pfam match to PF02433.13 FixO.
       0.532
ccoQ
Cytochrome c oxidase CcoNOPQ, cbb3-type, subunit IV; Pfam match to PF05545.9 FixQ.
       0.532
ccoP
Cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
       0.532
Your Current Organism:
Campylobacter helveticus
NCBI taxonomy Id: 28898
Other names: ATCC 51209, C. helveticus, CCUG 30682, CIP 104877, LMG 12638, LMG 19528, LMG:12638, LMG:19528, NCTC 12470
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.