STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARE81308.1Mechanosensitive ion channel family protein; Pfam match to PF00924.16 MS_channel. (627 aa)    
Predicted Functional Partners:
canB
Carbonic anhydrase, beta class; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
    0.803
ARE81309.1
Fumarylacetoacetate (FAA) hydrolase family protein; Pfam match to PF01557.16 FAA_hydrolase.
       0.784
ARE81306.1
BAX inhibitor (BI)-1 like protein (UPF0005 domain); Pfam match to PF01027.18 Bax1-I; Belongs to the BI1 family.
  
    0.601
ARE80723.1
Putative heat shock protein HslJ; Pfam match to PF03724.14 META.
 
     0.536
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
 
     0.495
kefB
Glutathione-regulated potassium-efflux system protein KefB; Pfam matches to PF00999.19 Na_H_Exchanger, and to PF02254.16 TrkA_N; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.491
secG
Preprotein translocase SecYEG, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
       0.466
frr
Ribosome releasing factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
       0.464
ARE79979.1
AsmA family protein (DUF3971 domain); Pfam matches to PF13109.4 AsmA_1, and to PF13116.4 DUF3971.
  
     0.438
ARE81302.1
Hypothetical protein (RDD domain); Pfam match to PF06271.10 RDD.
       0.427
Your Current Organism:
Campylobacter helveticus
NCBI taxonomy Id: 28898
Other names: ATCC 51209, C. helveticus, CCUG 30682, CIP 104877, LMG 12638, LMG 19528, LMG:12638, LMG:19528, NCTC 12470
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