Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE69981.1 | SHE70014.1 | SAMN04488522_101951 | SAMN04488522_101952 | Transcriptional regulator, AraC family. | Hypothetical protein. | 0.741 |
SHE69981.1 | SHE70042.1 | SAMN04488522_101951 | SAMN04488522_101953 | Transcriptional regulator, AraC family. | Uncharacterized membrane protein YiaA. | 0.681 |
SHE69981.1 | SHE70069.1 | SAMN04488522_101951 | SAMN04488522_101954 | Transcriptional regulator, AraC family. | Hypothetical protein. | 0.448 |
SHE69981.1 | ribB | SAMN04488522_101951 | SAMN04488522_101950 | Transcriptional regulator, AraC family. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. | 0.683 |
SHE70014.1 | SHE69981.1 | SAMN04488522_101952 | SAMN04488522_101951 | Hypothetical protein. | Transcriptional regulator, AraC family. | 0.741 |
SHE70014.1 | SHE70042.1 | SAMN04488522_101952 | SAMN04488522_101953 | Hypothetical protein. | Uncharacterized membrane protein YiaA. | 0.710 |
SHE70014.1 | SHE70069.1 | SAMN04488522_101952 | SAMN04488522_101954 | Hypothetical protein. | Hypothetical protein. | 0.465 |
SHE70014.1 | ribB | SAMN04488522_101952 | SAMN04488522_101950 | Hypothetical protein. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. | 0.514 |
SHE70042.1 | SHE69981.1 | SAMN04488522_101953 | SAMN04488522_101951 | Uncharacterized membrane protein YiaA. | Transcriptional regulator, AraC family. | 0.681 |
SHE70042.1 | SHE70014.1 | SAMN04488522_101953 | SAMN04488522_101952 | Uncharacterized membrane protein YiaA. | Hypothetical protein. | 0.710 |
SHE70042.1 | SHE70069.1 | SAMN04488522_101953 | SAMN04488522_101954 | Uncharacterized membrane protein YiaA. | Hypothetical protein. | 0.501 |
SHE70042.1 | ribB | SAMN04488522_101953 | SAMN04488522_101950 | Uncharacterized membrane protein YiaA. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. | 0.476 |
SHE70069.1 | SHE69981.1 | SAMN04488522_101954 | SAMN04488522_101951 | Hypothetical protein. | Transcriptional regulator, AraC family. | 0.448 |
SHE70069.1 | SHE70014.1 | SAMN04488522_101954 | SAMN04488522_101952 | Hypothetical protein. | Hypothetical protein. | 0.465 |
SHE70069.1 | SHE70042.1 | SAMN04488522_101954 | SAMN04488522_101953 | Hypothetical protein. | Uncharacterized membrane protein YiaA. | 0.501 |
ribB | SHE69981.1 | SAMN04488522_101950 | SAMN04488522_101951 | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. | Transcriptional regulator, AraC family. | 0.683 |
ribB | SHE70014.1 | SAMN04488522_101950 | SAMN04488522_101952 | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. | Hypothetical protein. | 0.514 |
ribB | SHE70042.1 | SAMN04488522_101950 | SAMN04488522_101953 | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. | Uncharacterized membrane protein YiaA. | 0.476 |