Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF18522.1 | SHF18549.1 | SAMN04488522_102363 | SAMN04488522_102364 | Hypothetical protein. | Regulator of nucleoside diphosphate kinase. | 0.486 |
SHF18549.1 | SHF18522.1 | SAMN04488522_102364 | SAMN04488522_102363 | Regulator of nucleoside diphosphate kinase. | Hypothetical protein. | 0.486 |
SHF18549.1 | SHH06564.1 | SAMN04488522_102364 | SAMN04488522_11121 | Regulator of nucleoside diphosphate kinase. | RNA polymerase Rpb6. | 0.838 |
SHF18549.1 | cmk | SAMN04488522_102364 | SAMN04488522_104908 | Regulator of nucleoside diphosphate kinase. | Cytidylate kinase. | 0.509 |
SHF18549.1 | dut | SAMN04488522_102364 | SAMN04488522_108274 | Regulator of nucleoside diphosphate kinase. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.610 |
SHF18549.1 | gmk | SAMN04488522_102364 | SAMN04488522_10770 | Regulator of nucleoside diphosphate kinase. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.496 |
SHF18549.1 | pyrG | SAMN04488522_102364 | SAMN04488522_105115 | Regulator of nucleoside diphosphate kinase. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.502 |
SHF18549.1 | pyrH | SAMN04488522_102364 | SAMN04488522_1034 | Regulator of nucleoside diphosphate kinase. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.509 |
SHF18549.1 | rpoA | SAMN04488522_102364 | SAMN04488522_103514 | Regulator of nucleoside diphosphate kinase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.839 |
SHF18549.1 | rpoB | SAMN04488522_102364 | SAMN04488522_103778 | Regulator of nucleoside diphosphate kinase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.852 |
SHF18549.1 | rpoC | SAMN04488522_102364 | SAMN04488522_103779 | Regulator of nucleoside diphosphate kinase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.881 |
SHH06564.1 | SHF18549.1 | SAMN04488522_11121 | SAMN04488522_102364 | RNA polymerase Rpb6. | Regulator of nucleoside diphosphate kinase. | 0.838 |
SHH06564.1 | gmk | SAMN04488522_11121 | SAMN04488522_10770 | RNA polymerase Rpb6. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.895 |
SHH06564.1 | rpoA | SAMN04488522_11121 | SAMN04488522_103514 | RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
SHH06564.1 | rpoB | SAMN04488522_11121 | SAMN04488522_103778 | RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
SHH06564.1 | rpoC | SAMN04488522_11121 | SAMN04488522_103779 | RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
cmk | SHF18549.1 | SAMN04488522_104908 | SAMN04488522_102364 | Cytidylate kinase. | Regulator of nucleoside diphosphate kinase. | 0.509 |
cmk | dut | SAMN04488522_104908 | SAMN04488522_108274 | Cytidylate kinase. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.420 |
cmk | gmk | SAMN04488522_104908 | SAMN04488522_10770 | Cytidylate kinase. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.640 |
cmk | pyrG | SAMN04488522_104908 | SAMN04488522_105115 | Cytidylate kinase. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.697 |
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