Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF31027.1 | SHF31078.1 | SAMN04488522_102796 | SAMN04488522_102798 | PAS domain-containing protein. | HlyD family secretion protein. | 0.870 |
SHF31027.1 | SHF31108.1 | SAMN04488522_102796 | SAMN04488522_102799 | PAS domain-containing protein. | Putative ABC transport system ATP-binding protein. | 0.771 |
SHF31027.1 | SHF31183.1 | SAMN04488522_102796 | SAMN04488522_102802 | PAS domain-containing protein. | ABC-type antimicrobial peptide transport system, permease component. | 0.823 |
SHF31027.1 | SHF31212.1 | SAMN04488522_102796 | SAMN04488522_102803 | PAS domain-containing protein. | Putative ABC transport system permease protein. | 0.819 |
SHF31027.1 | SHF31244.1 | SAMN04488522_102796 | SAMN04488522_102804 | PAS domain-containing protein. | Duplicated orphan permease. | 0.817 |
SHF31027.1 | SHF31269.1 | SAMN04488522_102796 | SAMN04488522_102805 | PAS domain-containing protein. | ABC-type lipoprotein export system, ATPase component. | 0.658 |
SHF31027.1 | SHG61263.1 | SAMN04488522_102796 | SAMN04488522_106253 | PAS domain-containing protein. | Putative ABC transport system ATP-binding protein. | 0.719 |
SHF31027.1 | SHG61302.1 | SAMN04488522_102796 | SAMN04488522_106254 | PAS domain-containing protein. | HlyD family secretion protein. | 0.786 |
SHF31027.1 | SHG61373.1 | SAMN04488522_102796 | SAMN04488522_106256 | PAS domain-containing protein. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.426 |
SHF31078.1 | SHF31027.1 | SAMN04488522_102798 | SAMN04488522_102796 | HlyD family secretion protein. | PAS domain-containing protein. | 0.870 |
SHF31078.1 | SHF31108.1 | SAMN04488522_102798 | SAMN04488522_102799 | HlyD family secretion protein. | Putative ABC transport system ATP-binding protein. | 0.932 |
SHF31078.1 | SHF31183.1 | SAMN04488522_102798 | SAMN04488522_102802 | HlyD family secretion protein. | ABC-type antimicrobial peptide transport system, permease component. | 0.931 |
SHF31078.1 | SHF31212.1 | SAMN04488522_102798 | SAMN04488522_102803 | HlyD family secretion protein. | Putative ABC transport system permease protein. | 0.927 |
SHF31078.1 | SHF31244.1 | SAMN04488522_102798 | SAMN04488522_102804 | HlyD family secretion protein. | Duplicated orphan permease. | 0.853 |
SHF31078.1 | SHF31269.1 | SAMN04488522_102798 | SAMN04488522_102805 | HlyD family secretion protein. | ABC-type lipoprotein export system, ATPase component. | 0.878 |
SHF31078.1 | SHG61263.1 | SAMN04488522_102798 | SAMN04488522_106253 | HlyD family secretion protein. | Putative ABC transport system ATP-binding protein. | 0.873 |
SHF31078.1 | SHG61373.1 | SAMN04488522_102798 | SAMN04488522_106256 | HlyD family secretion protein. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.768 |
SHF31078.1 | SHG79907.1 | SAMN04488522_102798 | SAMN04488522_107293 | HlyD family secretion protein. | Putative ABC transport system ATP-binding protein. | 0.683 |
SHF31108.1 | SHF31027.1 | SAMN04488522_102799 | SAMN04488522_102796 | Putative ABC transport system ATP-binding protein. | PAS domain-containing protein. | 0.771 |
SHF31108.1 | SHF31078.1 | SAMN04488522_102799 | SAMN04488522_102798 | Putative ABC transport system ATP-binding protein. | HlyD family secretion protein. | 0.932 |
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