STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO95975.1Benzoate/toluate 1,2-dioxygenase reductase subunit. (336 aa)    
Predicted Functional Partners:
SFO95946.1
1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 0.997
nuoC
NADH dehydrogenase subunit C /NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
  
 
 0.988
SFP81598.1
2,4-dienoyl-CoA reductase.
  
 0.986
SFO96001.1
Benzoate/toluate 1,2-dioxygenase beta subunit.
 
 
 0.981
SFP03863.1
Glutamate synthase (NADPH/NADH) small chain.
  
 0.980
SFP57799.1
Glutamate synthase (NADPH) small subunit.
  
 0.980
SFP87311.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
   
 0.980
SFO96021.1
Benzoate 1,2-dioxygenase, alpha subunit.
 
 
 0.973
SFP03848.1
Dihydroorotate oxidase B, catalytic subunit.
  
 0.972
SFO95841.1
Catechol 1,2-dioxygenase.
 
 
 0.968
Your Current Organism:
Pseudomonas borbori
NCBI taxonomy Id: 289003
Other names: DSM 17834, LMG 23199, LMG:23199, P. borbori, Pseudomonas borbori Vanparys et al. 2006, Pseudomonas sp. R-20946, Pseudomonas sp. R-20955, Pseudomonas sp. R-23040, strain R-20821
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.