Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFO86919.1 | SFO87042.1 | SAMN05216190_10221 | SAMN05216190_10227 | CheW protein. | Two-component system, chemotaxis family, sensor kinase CheA. | 0.999 |
SFO86919.1 | SFO91677.1 | SAMN05216190_10221 | SAMN05216190_102215 | CheW protein. | CheW protein. | 0.813 |
SFO86919.1 | SFO92017.1 | SAMN05216190_10221 | SAMN05216190_102229 | CheW protein. | Two-component system, chemotaxis family, response regulator CheV. | 0.849 |
SFO86919.1 | SFP03527.1 | SAMN05216190_10221 | SAMN05216190_10444 | CheW protein. | Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator). | 0.995 |
SFO86919.1 | SFP03548.1 | SAMN05216190_10221 | SAMN05216190_10445 | CheW protein. | Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator). | 0.997 |
SFO86919.1 | SFP11598.1 | SAMN05216190_10221 | SAMN05216190_10559 | CheW protein. | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | 0.941 |
SFO86919.1 | SFP30234.1 | SAMN05216190_10221 | SAMN05216190_10853 | CheW protein. | Two-component system, chemotaxis family, response regulator CheV. | 0.857 |
SFO86919.1 | SFP73537.1 | SAMN05216190_10221 | SAMN05216190_11739 | CheW protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.934 |
SFO86919.1 | SFP99502.1 | SAMN05216190_10221 | SAMN05216190_12766 | CheW protein. | CheW protein. | 0.656 |
SFO86919.1 | SFQ30999.1 | SAMN05216190_10221 | SAMN05216190_1597 | CheW protein. | CheA signal transduction histidine kinase. | 0.998 |
SFO87042.1 | SFO86919.1 | SAMN05216190_10227 | SAMN05216190_10221 | Two-component system, chemotaxis family, sensor kinase CheA. | CheW protein. | 0.999 |
SFO87042.1 | SFO91677.1 | SAMN05216190_10227 | SAMN05216190_102215 | Two-component system, chemotaxis family, sensor kinase CheA. | CheW protein. | 0.996 |
SFO87042.1 | SFO92017.1 | SAMN05216190_10227 | SAMN05216190_102229 | Two-component system, chemotaxis family, sensor kinase CheA. | Two-component system, chemotaxis family, response regulator CheV. | 0.999 |
SFO87042.1 | SFP03527.1 | SAMN05216190_10227 | SAMN05216190_10444 | Two-component system, chemotaxis family, sensor kinase CheA. | Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator). | 0.898 |
SFO87042.1 | SFP03548.1 | SAMN05216190_10227 | SAMN05216190_10445 | Two-component system, chemotaxis family, sensor kinase CheA. | Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator). | 0.895 |
SFO87042.1 | SFP11598.1 | SAMN05216190_10227 | SAMN05216190_10559 | Two-component system, chemotaxis family, sensor kinase CheA. | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | 0.957 |
SFO87042.1 | SFP30234.1 | SAMN05216190_10227 | SAMN05216190_10853 | Two-component system, chemotaxis family, sensor kinase CheA. | Two-component system, chemotaxis family, response regulator CheV. | 0.998 |
SFO87042.1 | SFP73537.1 | SAMN05216190_10227 | SAMN05216190_11739 | Two-component system, chemotaxis family, sensor kinase CheA. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.977 |
SFO87042.1 | SFP99502.1 | SAMN05216190_10227 | SAMN05216190_12766 | Two-component system, chemotaxis family, sensor kinase CheA. | CheW protein. | 0.998 |
SFO87042.1 | SFQ30999.1 | SAMN05216190_10227 | SAMN05216190_1597 | Two-component system, chemotaxis family, sensor kinase CheA. | CheA signal transduction histidine kinase. | 0.901 |
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