STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppkPolyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. (736 aa)    
Predicted Functional Partners:
SFP38240.1
Ppx/GppA phosphatase; Belongs to the GppA/Ppx family.
 
  
 0.948
SFP96628.1
Polyphosphate kinase 2, PPK2 family.
 
  
 0.886
SFO83216.1
Polyphosphate:AMP phosphotransferase.
 
  
 0.866
SFP61887.1
Polyphosphate kinase 2, PA0141 family.
 
  
 0.837
SFP38194.1
Porphobilinogen synthase; Belongs to the ALAD family.
  
    0.763
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
     
 0.758
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.678
SFP63715.1
CBS domain-containing protein.
    
  0.631
SFQ26395.1
CBS domain-containing membrane protein.
    
  0.628
SFP77687.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.
    
  0.593
Your Current Organism:
Pseudomonas borbori
NCBI taxonomy Id: 289003
Other names: DSM 17834, LMG 23199, LMG:23199, P. borbori, Pseudomonas borbori Vanparys et al. 2006, Pseudomonas sp. R-20946, Pseudomonas sp. R-20955, Pseudomonas sp. R-23040, strain R-20821
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