STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP57693.1Acyl-coenzyme A thioesterase PaaI, contains HGG motif. (147 aa)    
Predicted Functional Partners:
SFQ13712.1
Hypothetical protein.
  
 
  0.667
SFP43763.1
3-ketosteroid 9alpha-monooxygenase subunit B.
  
 
  0.662
SFQ31781.1
Ferredoxin-NADP reductase.
  
 
  0.662
SFP57719.1
Nucleotide-binding universal stress protein, UspA family.
       0.607
SFP57668.1
Thioredoxin.
       0.598
SFP13423.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
  0.585
plsX
Phosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.492
SFP57645.1
O-acetylhomoserine sulfhydrylase.
  
    0.491
SFQ20801.1
Short chain enoyl-CoA hydratase.
 
 
 0.480
SFO91877.1
Transcriptional regulator, AraC family.
  
     0.469
Your Current Organism:
Pseudomonas borbori
NCBI taxonomy Id: 289003
Other names: DSM 17834, LMG 23199, LMG:23199, P. borbori, Pseudomonas borbori Vanparys et al. 2006, Pseudomonas sp. R-20946, Pseudomonas sp. R-20955, Pseudomonas sp. R-23040, strain R-20821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.