STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP91954.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
SFP66274.1
Uncharacterized membrane protein affecting hemolysin expression.
  
     0.754
SFO91377.1
Hypothetical protein.
  
     0.743
SFP95955.1
Multi-sensor signal transduction histidine kinase.
  
     0.723
SFP37115.1
Hypothetical protein.
  
     0.702
SFP53294.1
Hypothetical protein.
  
     0.661
SFO87432.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
  
 0.631
SFP03527.1
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator).
  
  
 0.621
SFP82330.1
Signal transduction histidine kinase.
  
  
 0.618
SFP18471.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  
     0.613
SFP35733.1
HD-like signal output (HDOD) domain, no enzymatic activity.
  
     0.594
Your Current Organism:
Pseudomonas borbori
NCBI taxonomy Id: 289003
Other names: DSM 17834, LMG 23199, LMG:23199, P. borbori, Pseudomonas borbori Vanparys et al. 2006, Pseudomonas sp. R-20946, Pseudomonas sp. R-20955, Pseudomonas sp. R-23040, strain R-20821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.