STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP94288.1Reductase C-terminal. (411 aa)    
Predicted Functional Partners:
SFP94305.1
Ferredoxin, 2Fe-2S.
 
 
 0.991
SFO81418.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
  
 0.982
SFQ30062.1
Ferredoxin, 2Fe-2S.
 
 
 0.974
SFQ07436.1
Ferredoxin, 2Fe-2S.
 
 
 0.935
SFP47627.1
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
  0.928
SFP89867.1
Nitrite reductase (NADH) small subunit.
 0.897
SFP31173.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
   
 0.884
SFP31245.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
   
 0.884
SFP94219.1
3-phenylpropionate/cinnamic acid dioxygenase, small subunit.
 
 
 0.831
SFP47653.1
Assimilatory nitrite reductase (NAD(P)H) small subunit.
  
 0.830
Your Current Organism:
Pseudomonas borbori
NCBI taxonomy Id: 289003
Other names: DSM 17834, LMG 23199, LMG:23199, P. borbori, Pseudomonas borbori Vanparys et al. 2006, Pseudomonas sp. R-20946, Pseudomonas sp. R-20955, Pseudomonas sp. R-23040, strain R-20821
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