STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ32647.1Aryl-alcohol dehydrogenase/geraniol dehydrogenase (NAD+). (374 aa)    
Predicted Functional Partners:
SFP43100.1
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
 0.977
SFP73381.1
Alcohol dehydrogenase.
   
 0.949
SFP80122.1
Hypothetical protein.
   
 0.949
SFQ24039.1
Alcohol dehydrogenase, class IV.
   
 0.949
SFP19903.1
Uncharacterized zinc-type alcohol dehydrogenase-like protein.
  
 
0.919
SFQ32690.1
P-cymene monooxygenase electron transfer component.
 
 
 0.876
tadA
tRNA(Arg) A34 adenosine deaminase TadA; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
 
  0.814
SFP38337.1
CDP-4-dehydro-6-deoxyglucose reductase.
 
 
 0.749
SFO95975.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
 
 
 0.746
SFP91511.1
(R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase.
  
 
0.734
Your Current Organism:
Pseudomonas borbori
NCBI taxonomy Id: 289003
Other names: DSM 17834, LMG 23199, LMG:23199, P. borbori, Pseudomonas borbori Vanparys et al. 2006, Pseudomonas sp. R-20946, Pseudomonas sp. R-20955, Pseudomonas sp. R-23040, strain R-20821
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