STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQU85331.1Deacetylase SIR2; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)    
Predicted Functional Partners:
gcvH
Glycine cleavage system protein H; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.903
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.872
dnaJ
Hypothetical protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, Dna [...]
   
 0.822
limB
Luciferase family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.818
AQU85330.1
Lipoate--protein ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.803
namA
NADH-dependent flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.691
AQU85329.1
Lipoate--protein ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.632
AQU85334.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.504
AQU85378.1
Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
 
 0.492
AQU85511.1
Ribose-phosphate pyrophosphokinase; Catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.441
Your Current Organism:
Mycoplasma bovis
NCBI taxonomy Id: 28903
Other names: ATCC 25523, Bovine serotype 5, DSM 22781, M. bovis, Mycoplasma agalactiae subsp. bovis, Mycoplasma agalactiae var. bovis, Mycoplasma bovimastitidis, Mycoplasmopsis bovis, NCTC 10131, strain Donetta, strain PG 45, strain PG45
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