STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQU85451.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (633 aa)    
Predicted Functional Partners:
AQU85450.1
Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.995
AQU85449.1
Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.994
AQU85448.1
Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
    
 0.973
AQU85891.1
Nucleotide exchange factor GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds [...]
 
   
 0.781
AQU85427.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.775
AQU85625.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.775
AQU85931.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.775
AQU86033.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.775
lspA
Peptidase A8; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase A8 family.
  
     0.774
AQU85458.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
Your Current Organism:
Mycoplasma bovis
NCBI taxonomy Id: 28903
Other names: ATCC 25523, Bovine serotype 5, DSM 22781, M. bovis, Mycoplasma agalactiae subsp. bovis, Mycoplasma agalactiae var. bovis, Mycoplasma bovimastitidis, Mycoplasmopsis bovis, NCTC 10131, strain Donetta, strain PG 45, strain PG45
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