STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQU85979.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (918 aa)    
Predicted Functional Partners:
AQU85980.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.471
AQU85638.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.448
AQU85976.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.441
AQU85977.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.441
AQU85978.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.441
AQU85537.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.410
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
   
  0.403
Your Current Organism:
Mycoplasma bovis
NCBI taxonomy Id: 28903
Other names: ATCC 25523, Bovine serotype 5, DSM 22781, M. bovis, Mycoplasma agalactiae subsp. bovis, Mycoplasma agalactiae var. bovis, Mycoplasma bovimastitidis, Mycoplasmopsis bovis, NCTC 10131, strain Donetta, strain PG 45, strain PG45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.