STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0K921BZ3500_MvSof-1268-A1-R1_Chr2-1g04552 protein. (1010 aa)    
Predicted Functional Partners:
A0A2X0KHT6
BZ3500_MvSof-1268-A1-R1_Chr2-1g04201 protein.
    
 0.693
A0A2X0L1U8
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.675
A0A2X0K8U2
BZ3500_MvSof-1268-A1-R1_Chr1-1g00931 protein.
    
  0.672
A0A2X0KP68
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.672
A0A2X0NGW4
BZ3500_MvSof-1268-A1-R1_Chr4-3g07349 protein.
    
  0.672
A0A2X0MXI0
BZ3500_MvSof-1268-A1-R1_Chr7-1g09452 protein.
    
 0.670
A0A2X0KLE9
BZ3500_MvSof-1268-A1-R1_Chr6-3g08786 protein.
    
 0.642
A0A2X0L679
BZ3500_MvSof-1268-A1-R1_Chr9g10378 protein.
    
 0.642
A0A2X0NPZ2
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
    
 0.642
A0A2X0M7B5
BZ3500_MvSof-1268-A1-R1_Chr3-1g05945 protein.
    
  0.638
Your Current Organism:
Microbotryum saponariae
NCBI taxonomy Id: 289078
Other names: M. saponariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.