STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0KC09BZ3500_MvSof-1268-A1-R1_Chr1-1g00876 protein; Belongs to the DEAD box helicase family. (637 aa)    
Predicted Functional Partners:
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.979
A0A2X0KLF8
BZ3500_MvSof-1268-A1-R1_Chr5-2g08046 protein.
   
 0.971
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.968
A0A2X0KPL8
BZ3500_MvSof-1268-A1-R1_Chr8-1g09788 protein.
  
 
 0.960
A0A2X0N7E1
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 0.955
A0A2X0M4K2
BZ3500_MvSof-1268-A1-R1_Chr3-1g06171 protein.
  
0.952
A0A2X0KK88
BZ3500_MvSof-1268-A1-R1_Chr6-3g09006 protein.
   
 0.946
A0A2X0M2J6
BZ3500_MvSof-1268-A1-R1_Chr2-1g04359 protein.
   
 0.946
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
 0.939
A0A2X0M7N0
BZ3500_MvSof-1268-A1-R1_Chr2-2g05110 protein.
  
 
 0.938
Your Current Organism:
Microbotryum saponariae
NCBI taxonomy Id: 289078
Other names: M. saponariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.