STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0KF09BZ3500_MvSof-1268-A1-R1_Chr1-1g01075 protein. (319 aa)    
Predicted Functional Partners:
A0A2X0LR35
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
A0A2X0MED3
BZ3500_MvSof-1268-A1-R1_Chr5-2g07918 protein.
   
 0.999
A0A2X0K890
BZ3500_MvSof-1268-A1-R1_Chr2-1g04337 protein.
    
 0.998
A0A2X0LUI9
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.998
A0A2X0MTK3
BZ3500_MvSof-1268-A1-R1_Chr1-3g02288 protein.
    
 0.998
A0A2X0L398
BZ3500_MvSof-1268-A1-R1_Chr1-1g01017 protein.
    
 0.997
A0A2X0M8V8
BZ3500_MvSof-1268-A1-R1_Chr2-1g04184 protein.
   
 0.996
A0A2X0L8Y4
BZ3500_MvSof-1268-A1-R1_Chr10-1g02728 protein.
    
 0.995
A0A2X0K8S6
BZ3500_MvSof-1268-A1-R1_Chr9g10432 protein.
    
 0.994
A0A2X0MPT0
BZ3500_MvSof-1268-A1-R1_Chr8-2g10115 protein.
    
 0.979
Your Current Organism:
Microbotryum saponariae
NCBI taxonomy Id: 289078
Other names: M. saponariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.