STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0KF71BZ3500_MvSof-1268-A1-R1_Chr2-1g04592 protein. (752 aa)    
Predicted Functional Partners:
A0A2X0LRA8
BZ3500_MvSof-1268-A1-R1_Chr10-2g02920 protein.
    
 
 0.466
A0A2X0LNM4
BZ3500_MvSof-1268-A1-R1_Chr4-3g07317 protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.414
A0A2X0L6A4
BZ3500_MvSof-1268-A1-R1_Chr9g10637 protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.410
Your Current Organism:
Microbotryum saponariae
NCBI taxonomy Id: 289078
Other names: M. saponariae
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.