STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0KJS3BZ3500_MvSof-1268-A1-R1_Chr1-1g00953 protein. (523 aa)    
Predicted Functional Partners:
A0A2X0NPR6
Aspartate aminotransferase.
    
 0.778
A0A2X0L1L5
Aspartate aminotransferase.
    
 0.772
A0A2X0MAF8
BZ3500_MvSof-1268-A1-R1_Chr10-3g03077 protein.
    
 0.751
A0A2X0KUV3
BZ3500_MvSof-1268-A1-R1_Chr8-1g10036 protein.
     
 0.742
A0A2X0KAY3
BZ3500_MvSof-1268-A1-R1_Chr1-3g01986 protein.
     
 0.741
A0A2X0KZT5
BZ3500_MvSof-1268-A1-R1_Chr10-3g03080 protein.
     
 0.730
A0A2X0LEF4
BZ3500_MvSof-1268-A1-R1_Chr12-1g03658 protein.
     
 0.678
A0A2X0N0M5
BZ3500_MvSof-1268-A1-R1_Chr3-1g05570 protein.
     
 0.678
A0A2X0KZR9
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
     
 0.675
A0A2X0LAS8
BZ3500_MvSof-1268-A1-R1_Chr3-1g06121 protein.
     
 0.672
Your Current Organism:
Microbotryum saponariae
NCBI taxonomy Id: 289078
Other names: M. saponariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.