STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0KSV1Endonuclease. (377 aa)    
Predicted Functional Partners:
A0A2X0LN50
BZ3500_MvSof-1268-A1-R1_Chr4-2g07013 protein.
   
   0.929
A0A2X0M8X7
BZ3500_MvSof-1268-A1-R1_Chr9g10857 protein.
   
   0.888
A0A2X0LDY2
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
  
 0.825
A0A2X0MNF7
BZ3500_MvSof-1268-A1-R1_Chr1-3g02272 protein.
    
 
 0.703
A0A2X0KEH1
Glucose-6-phosphate 1-epimerase; Catalyzes the interconversion between the alpha and beta anomers from at least three hexose 6-phosphate sugars (Glc6P, Gal6P, and Man6P).
    
   0.668
A0A2X0KF50
BZ3500_MvSof-1268-A1-R1_Chr2-1g04090 protein.
    
 
 0.629
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]
   
 
 0.619
A0A2X0LGX1
BZ3500_MvSof-1268-A1-R1_Chr3-3g06423 protein.
   
 
 0.619
A0A2X0K8C4
BZ3500_MvSof-1268-A1-R1_Chr1-1g01106 protein.
    
 
 0.606
A0A2X0KFE2
BZ3500_MvSof-1268-A1-R1_Chr2-1g04200 protein.
    
 
 0.606
Your Current Organism:
Microbotryum saponariae
NCBI taxonomy Id: 289078
Other names: M. saponariae
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