STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0KTT7BZ3500_MvSof-1268-A1-R1_Chr1-3g02011 protein. (380 aa)    
Predicted Functional Partners:
A0A2X0NPH7
BZ3500_MvSof-1268-A1-R1_Chr8-1g09840 protein.
   
 0.955
A0A2X0M7Z8
BZ3500_MvSof-1268-A1-R1_Chr8-1g09997 protein.
    
 0.929
A0A2X0MWS3
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.901
A0A2X0MEC4
BZ3500_MvSof-1268-A1-R1_Chr1-3g01838 protein.
    
 0.894
A0A2X0NHQ3
BZ3500_MvSof-1268-A1-R1_Chr3-1g05506 protein.
   
 
 0.862
A0A2X0LRQ4
BZ3500_MvSof-1268-A1-R1_Chr7-1g09324 protein.
    
 0.770
A0A2X0KZI5
BZ3500_MvSof-1268-A1-R1_Chr2-1g04543 protein.
    
  0.728
A0A2X0KRI7
BZ3500_MvSof-1268-A1-R1_Chr4-4g07495 protein.
    
  0.678
A0A2X0MGT7
BZ3500_MvSof-1268-A1-R1_Chr1-3g02198 protein.
    
  0.678
A0A2X0N766
BZ3500_MvSof-1268-A1-R1_Chr9g10769 protein.
    
  0.678
Your Current Organism:
Microbotryum saponariae
NCBI taxonomy Id: 289078
Other names: M. saponariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.