STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0KVP1BZ3500_MvSof-1268-A1-R1_Chr1-3g02520 protein; Belongs to the spermidine/spermine synthase family. (766 aa)    
Predicted Functional Partners:
A0A2X0NCF0
BZ3500_MvSof-1268-A1-R1_Chr7-1g09064 protein.
   
 
 0.918
A0A2X0KL10
BZ3500_MvSof-1268-A1-R1_Chr1-3g01655 protein.
  
 
 0.888
A0A2X0L3G6
BZ3500_MvSof-1268-A1-R1_Chr2-3g05278 protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.844
A0A2X0K990
BZ3500_MvSof-1268-A1-R1_Chr2-1g04603 protein.
   
  
 0.813
A0A2X0NMK2
BZ3500_MvSof-1268-A1-R1_Chr6-3g08805 protein; Belongs to the aldehyde dehydrogenase family.
  
 
 0.795
A0A2X0MZK6
BZ3500_MvSof-1268-A1-R1_Chr3-2g06290 protein.
     
 0.785
A0A2X0L8R0
BZ3500_MvSof-1268-A1-R1_Chr2-3g05232 protein.
    
 0.748
A0A2X0LFQ0
Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis.
   
  
 0.686
A0A2X0L681
BZ3500_MvSof-1268-A1-R1_Chr2-1g04256 protein.
   
 
 0.662
A0A2X0L7Z2
Arginase; Belongs to the arginase family.
    
 0.590
Your Current Organism:
Microbotryum saponariae
NCBI taxonomy Id: 289078
Other names: M. saponariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.