STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0KXP5BZ3500_MvSof-1268-A1-R1_Chr1-2g01366 protein. (352 aa)    
Predicted Functional Partners:
A0A2X0KEU4
BZ3500_MvSof-1268-A1-R1_Chr1-3g01768 protein; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.900
A0A2X0LRA6
BZ3500_MvSof-1268-A1-R1_Chr8-1g09814 protein.
   
  
 0.858
A0A2X0LRY0
BZ3500_MvSof-1268-A1-R1_Chr8-2g10205 protein; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.855
A0A2X0N474
BZ3500_MvSof-1268-A1-R1_Chr9g10392 protein.
   
    0.853
A0A2X0NKB7
BZ3500_MvSof-1268-A1-R1_Chr4-1g06741 protein.
   
    0.837
A0A2X0M2J6
BZ3500_MvSof-1268-A1-R1_Chr2-1g04359 protein.
   
    0.830
A0A2X0MD61
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
    0.728
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.719
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.
    
 
 0.701
A0A2X0M2V4
BZ3500_MvSof-1268-A1-R1_Chr7-1g09398 protein.
   
    0.697
Your Current Organism:
Microbotryum saponariae
NCBI taxonomy Id: 289078
Other names: M. saponariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.