STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0KYB0BZ3500_MvSof-1268-A1-R1_Chr7-1g09413 protein. (237 aa)    
Predicted Functional Partners:
A0A2X0LI67
BZ3500_MvSof-1268-A1-R1_Chr3-1g05537 protein.
   
 0.893
A0A2X0NG33
BZ3500_MvSof-1268-A1-R1_Chr4-2g06977 protein.
   
 0.868
A0A2X0K8J4
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
  
 0.859
A0A2X0NFA6
BZ3500_MvSof-1268-A1-R1_Chr4-1g06647 protein.
    
 0.853
A0A2X0MUC7
BZ3500_MvSof-1268-A1-R1_Chr1-3g02381 protein; Belongs to the PI3/PI4-kinase family.
   
 0.850
A0A2X0L5U7
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.849
A0A2X0LI74
BZ3500_MvSof-1268-A1-R1_Chr3-1g05700 protein.
   
 0.840
A0A2X0MQS2
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.840
A0A2X0KWS4
BZ3500_MvSof-1268-A1-R1_Chr3-1g05465 protein.
   
 0.839
A0A2X0KX80
BZ3500_MvSof-1268-A1-R1_Chr3-1g05582 protein.
   
 0.829
Your Current Organism:
Microbotryum saponariae
NCBI taxonomy Id: 289078
Other names: M. saponariae
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