STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0KZR9Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family. (2414 aa)    
Predicted Functional Partners:
A0A2X0LQZ4
BZ3500_MvSof-1268-A1-R1_Chr3-1g05521 protein.
   
 0.998
A0A2X0M7N8
BZ3500_MvSof-1268-A1-R1_Chr1-3g01776 protein; Belongs to the WD repeat SEC13 family.
    
 0.994
A0A2X0KP18
BZ3500_MvSof-1268-A1-R1_Chr6-3g08866 protein.
   
 0.985
A0A2X0NHM4
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.982
A0A2X0LLU4
BZ3500_MvSof-1268-A1-R1_Chr1-2g01353 protein.
   
 0.937
A0A2X0M2G4
BZ3500_MvSof-1268-A1-R1_Chr2-1g04333 protein; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.926
A0A2X0MAE8
BZ3500_MvSof-1268-A1-R1_Chr10-1g02646 protein.
    
 
 0.917
A0A2X0NDV9
BZ3500_MvSof-1268-A1-R1_Chr7-1g09457 protein.
    
 0.882
A0A2X0KV07
BZ3500_MvSof-1268-A1-R1_Chr3-3g06387 protein.
    
 0.875
A0A2X0KNJ6
BZ3500_MvSof-1268-A1-R1_Chr2-2g05107 protein.
    
 0.840
Your Current Organism:
Microbotryum saponariae
NCBI taxonomy Id: 289078
Other names: M. saponariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.