STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0L7C9BZ3500_MvSof-1268-A1-R1_Chr1-3g01842 protein. (517 aa)    
Predicted Functional Partners:
A0A2X0MS24
BZ3500_MvSof-1268-A1-R1_Chr11-2g03405 protein.
    
 
 0.951
A0A2X0L910
BZ3500_MvSof-1268-A1-R1_Chr2-3g05307 protein.
   
 
 0.947
A0A2X0L9P5
BZ3500_MvSof-1268-A1-R1_Chr10-1g02666 protein.
   
 
 0.938
A0A2X0LL01
BZ3500_MvSof-1268-A1-R1_Chr6-2g08527 protein.
    
 
 0.903
SUS1
Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]
    
 
 0.854
A0A2X0L4W7
BZ3500_MvSof-1268-A1-R1_Chr9g10350 protein.
   
 
 0.706
A0A2X0KRC3
BZ3500_MvSof-1268-A1-R1_Chr1-3g01840 protein.
    
 
 0.538
A0A2X0KV75
BZ3500_MvSof-1268-A1-R1_Chr7-3g09700 protein.
    
 
 0.538
A0A2X0LM88
BZ3500_MvSof-1268-A1-R1_Chr4-2g07143 protein; Belongs to the calmodulin family.
    
 
 0.538
A0A2X0M7X3
BZ3500_MvSof-1268-A1-R1_Chr2-3g05222 protein.
    
 
 0.538
Your Current Organism:
Microbotryum saponariae
NCBI taxonomy Id: 289078
Other names: M. saponariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.