STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0L8M1BZ3500_MvSof-1268-A1-R1_Chr7-1g09291 protein. (633 aa)    
Predicted Functional Partners:
A0A2X0KPP4
BZ3500_MvSof-1268-A1-R1_Chr6-3g08658 protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.954
A0A2X0L1Y9
BZ3500_MvSof-1268-A1-R1_Chr5-2g08119 protein.
   
 
 0.921
A0A2X0KNQ4
BZ3500_MvSof-1268-A1-R1_Chr2-2g05167 protein.
    
 
 0.917
A0A2X0MFS9
BZ3500_MvSof-1268-A1-R1_Chr1-3g01858 protein.
   
 
 0.912
A0A2X0N2M7
BZ3500_MvSof-1268-A1-R1_Chr7-1g09297 protein; Belongs to the universal ribosomal protein uS12 family.
   
   0.905
A0A2X0KRH5
BZ3500_MvSof-1268-A1-R1_Chr12-2g03741 protein.
   
 
 0.903
A0A2X0LJU9
BZ3500_MvSof-1268-A1-R1_Chr1-3g02493 protein.
    
 
 0.901
A0A2X0KCE7
BZ3500_MvSof-1268-A1-R1_Chr1-3g02058 protein.
    
 
 0.898
A0A2X0K9T7
BZ3500_MvSof-1268-A1-R1_Chr9g10431 protein; Belongs to the universal ribosomal protein uS9 family.
    
 
 0.897
A0A2X0LLZ8
BZ3500_MvSof-1268-A1-R1_Chr8-1g09888 protein.
    
 
 0.897
Your Current Organism:
Microbotryum saponariae
NCBI taxonomy Id: 289078
Other names: M. saponariae
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