STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0LB34BZ3500_MvSof-1268-A1-R1_Chr8-2g10158 protein; Belongs to the DEAD box helicase family. (537 aa)    
Predicted Functional Partners:
A0A2X0KV89
BZ3500_MvSof-1268-A1-R1_Chr3-3g06452 protein.
   
 0.995
A0A2X0NIV7
BZ3500_MvSof-1268-A1-R1_Chr5-2g07797 protein.
   
 0.989
A0A2X0M7T7
BZ3500_MvSof-1268-A1-R1_Chr2-2g05180 protein.
   
 0.982
A0A2X0MBH4
BZ3500_MvSof-1268-A1-R1_Chr1-1g00993 protein.
   
 
 0.978
A0A2X0KY19
BZ3500_MvSof-1268-A1-R1_Chr3-1g05788 protein.
   
 0.975
A0A2X0L4P3
BZ3500_MvSof-1268-A1-R1_Chr7-2g09528 protein.
   
 0.971
A0A2X0M4K2
BZ3500_MvSof-1268-A1-R1_Chr3-1g06171 protein.
  
0.969
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
 0.967
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.964
A0A2X0M2J6
BZ3500_MvSof-1268-A1-R1_Chr2-1g04359 protein.
   
 0.964
Your Current Organism:
Microbotryum saponariae
NCBI taxonomy Id: 289078
Other names: M. saponariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.