STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0LD46BZ3500_MvSof-1268-A1-R1_Chr11-1g03119 protein. (651 aa)    
Predicted Functional Partners:
A0A2X0LZF4
BZ3500_MvSof-1268-A1-R1_Chr8-2g10257 protein.
    
 0.772
A0A2X0L4Y2
DNA polymerase.
   
 0.760
A0A2X0LH29
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.754
A0A2X0KJ73
BZ3500_MvSof-1268-A1-R1_Chr2-1g04445 protein.
    
  0.749
A0A2X0KX80
BZ3500_MvSof-1268-A1-R1_Chr3-1g05582 protein.
    
 0.739
A0A2X0M964
Small nuclear ribonucleoprotein G.
    
  0.723
A0A2X0MGQ8
BZ3500_MvSof-1268-A1-R1_Chr1-3g02158 protein.
    
 0.707
A0A2X0KXU2
BZ3500_MvSof-1268-A1-R1_Chr4-1g06669 protein.
    
 0.694
A0A2X0L7W5
Small nuclear ribonucleoprotein Sm D3.
    
 0.658
A0A2X0MKK4
BZ3500_MvSof-1268-A1-R1_Chr5-2g07740 protein.
    
 0.650
Your Current Organism:
Microbotryum saponariae
NCBI taxonomy Id: 289078
Other names: M. saponariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.