STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0LDF4BZ3500_MvSof-1268-A1-R1_Chr7-1g09257 protein. (1726 aa)    
Predicted Functional Partners:
A0A2X0KZ34
Spindle pole body component.
    
 0.838
A0A2X0KRH4
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.810
A0A2X0LMA9
Spindle pole body component.
    
 0.796
A0A2X0KKU0
BZ3500_MvSof-1268-A1-R1_Chr1-1g01112 protein.
    
 0.788
A0A2X0LEB3
BZ3500_MvSof-1268-A1-R1_Chr3-1g06021 protein.
    
 0.788
A0A2X0MDD8
Spindle pole body component.
    
 0.788
A0A2X0KE60
BZ3500_MvSof-1268-A1-R1_Chr2-1g04437 protein.
    
 0.739
A0A2X0NHR3
BZ3500_MvSof-1268-A1-R1_Chr6-3g08781 protein.
   
 0.730
A0A2X0K5F6
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.687
A0A2X0KNH6
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.687
Your Current Organism:
Microbotryum saponariae
NCBI taxonomy Id: 289078
Other names: M. saponariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.