STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0LX56BZ3500_MvSof-1268-A1-R1_Chr2-3g05259 protein. (540 aa)    
Predicted Functional Partners:
A0A2X0KER8
BZ3500_MvSof-1268-A1-R1_Chr1-3g02390 protein.
   
 0.999
A0A2X0KQR8
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.998
A0A2X0L0P5
BZ3500_MvSof-1268-A1-R1_Chr9g10437 protein.
   
 0.998
A0A2X0K8U2
BZ3500_MvSof-1268-A1-R1_Chr1-1g00931 protein.
   
 0.997
A0A2X0KQ84
BZ3500_MvSof-1268-A1-R1_Chr12-2g03774 protein.
   
 0.997
A0A2X0MXC0
BZ3500_MvSof-1268-A1-R1_Chr1-2g01434 protein.
   
 0.997
A0A2X0NI49
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.997
A0A2X0KP68
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 0.996
A0A2X0M432
BZ3500_MvSof-1268-A1-R1_Chr3-1g06050 protein.
   
 0.996
A0A2X0L6U3
BZ3500_MvSof-1268-A1-R1_Chr7-3g09686 protein.
    
 0.994
Your Current Organism:
Microbotryum saponariae
NCBI taxonomy Id: 289078
Other names: M. saponariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.