STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0M295BZ3500_MvSof-1268-A1-R1_Chr10-1g02544 protein. (941 aa)    
Predicted Functional Partners:
A0A2X0KAP4
BZ3500_MvSof-1268-A1-R1_Chr1-1g01110 protein.
  
 0.996
A0A2X0KD11
BZ3500_MvSof-1268-A1-R1_Chr2-1g04225 protein.
  
 0.996
A0A2X0LBJ7
BZ3500_MvSof-1268-A1-R1_Chr8-2g10116 protein.
  
 0.996
A0A2X0K6R4
BZ3500_MvSof-1268-A1-R1_Chr2-1g04542 protein.
  
 0.995
A0A2X0KGY5
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.995
A0A2X0KKG1
BZ3500_MvSof-1268-A1-R1_Chr12-2g03734 protein.
   
 0.995
A0A2X0KKL2
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.995
A0A2X0KKN7
BZ3500_MvSof-1268-A1-R1_Chr6-2g08617 protein.
  
 0.995
A0A2X0KM46
BZ3500_MvSof-1268-A1-R1_Chr12-1g03681 protein.
   
 0.995
A0A2X0KUF9
BZ3500_MvSof-1268-A1-R1_Chr4-3g07257 protein.
   
 0.995
Your Current Organism:
Microbotryum saponariae
NCBI taxonomy Id: 289078
Other names: M. saponariae
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