STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0M2S7BZ3500_MvSof-1268-A1-R1_Chr2-1g04424 protein. (890 aa)    
Predicted Functional Partners:
A0A2X0LQ44
BZ3500_MvSof-1268-A1-R1_Chr3-2g06295 protein.
   
 
 0.915
A0A2X0KL25
BZ3500_MvSof-1268-A1-R1_Chr12-2g03882 protein.
   
 0.883
A0A2X0N7A0
RNA helicase.
    
 0.877
A0A2X0NGN4
BZ3500_MvSof-1268-A1-R1_Chr3-1g05495 protein.
    
 
 0.831
A0A2X0K5X9
BZ3500_MvSof-1268-A1-R1_Chr2-2g04873 protein.
   
   0.825
A0A2X0L5D0
BZ3500_MvSof-1268-A1-R1_Chr1-3g02366 protein.
    
 
 0.825
A0A2X0NKS6
BZ3500_MvSof-1268-A1-R1_Chr10-1g02678 protein.
    
 
 0.825
A0A2X0KNI3
BZ3500_MvSof-1268-A1-R1_Chr11-2g03453 protein.
   
   0.824
A0A2X0KV89
BZ3500_MvSof-1268-A1-R1_Chr3-3g06452 protein.
    
   0.822
A0A2X0KY19
BZ3500_MvSof-1268-A1-R1_Chr3-1g05788 protein.
    
   0.822
Your Current Organism:
Microbotryum saponariae
NCBI taxonomy Id: 289078
Other names: M. saponariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.