STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0M8T5BZ3500_MvSof-1268-A1-R1_Chr2-2g04841 protein. (778 aa)    
Predicted Functional Partners:
CLP1
mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
    
 0.998
A0A2X0NAH9
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.990
A0A2X0NPM5
BZ3500_MvSof-1268-A1-R1_Chr6-2g08480 protein.
    
 0.986
A0A2X0NIN8
BZ3500_MvSof-1268-A1-R1_Chr6-2g08535 protein.
    
 0.984
A0A2X0MIU4
BZ3500_MvSof-1268-A1-R1_Chr2-1g04374 protein.
    
 0.983
A0A2X0KL30
BZ3500_MvSof-1268-A1-R1_Chr5-2g07896 protein.
    
 0.972
A0A2X0LFI1
BZ3500_MvSof-1268-A1-R1_Chr5-2g07895 protein.
    
 0.972
A0A2X0KEW1
BZ3500_MvSof-1268-A1-R1_Chr1-3g02440 protein.
    
 0.971
A0A2X0KWA0
BZ3500_MvSof-1268-A1-R1_Chr9g10894 protein.
    
 0.971
A0A2X0L3E5
BZ3500_MvSof-1268-A1-R1_Chr3-1g05713 protein.
    
 0.970
Your Current Organism:
Microbotryum saponariae
NCBI taxonomy Id: 289078
Other names: M. saponariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.