STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0ME58BZ3500_MvSof-1268-A1-R1_Chr1-3g01802 protein. (897 aa)    
Predicted Functional Partners:
A0A2X0N1B1
BZ3500_MvSof-1268-A1-R1_Chr7-1g09328 protein.
   
 0.881
A0A2X0NI03
BZ3500_MvSof-1268-A1-R1_Chr12-1g03663 protein.
    
 0.683
A0A2X0MBY7
BZ3500_MvSof-1268-A1-R1_Chr4-2g07070 protein.
   
 0.599
A0A2X0KUD9
BZ3500_MvSof-1268-A1-R1_Chr4-4g07503 protein.
    
 0.597
A0A2X0LDS8
BZ3500_MvSof-1268-A1-R1_Chr3-1g06082 protein.
    
  0.541
A0A2X0NR82
BZ3500_MvSof-1268-A1-R1_Chr5-3g08239 protein.
    
 0.511
A0A2X0KZR9
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
    
 0.510
A0A2X0MKK4
BZ3500_MvSof-1268-A1-R1_Chr5-2g07740 protein.
    
 0.508
A0A2X0MLV0
BZ3500_MvSof-1268-A1-R1_Chr1-3g02036 protein.
    
  0.502
A0A2X0KYS5
BZ3500_MvSof-1268-A1-R1_Chr3-1g05952 protein.
    
 0.501
Your Current Organism:
Microbotryum saponariae
NCBI taxonomy Id: 289078
Other names: M. saponariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.