STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2X0N7X6BZ3500_MvSof-1268-A1-R1_Chr2-3g05373 protein. (813 aa)    
Predicted Functional Partners:
A0A2X0KHP3
BZ3500_MvSof-1268-A1-R1_C065g00318 protein.
    
 0.663
A0A2X0MNJ6
BZ3500_MvSof-1268-A1-R1_Chr8-1g09857 protein.
    
 0.645
A0A2X0KEV6
BZ3500_MvSof-1268-A1-R1_Chr5-3g08268 protein.
    
 0.627
A0A2X0KEE9
BZ3500_MvSof-1268-A1-R1_Chr1-1g00977 protein.
    
 0.599
A0A2X0L8Z0
BZ3500_MvSof-1268-A1-R1_Chr7-1g09359 protein.
    
 0.599
A0A2X0N7U8
BZ3500_MvSof-1268-A1-R1_Chr2-2g05103 protein.
    
 0.599
A0A2X0NKA5
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.599
A0A2X0L349
BZ3500_MvSof-1268-A1-R1_Chr3-1g05916 protein.
    
 0.596
A0A2X0MKK4
BZ3500_MvSof-1268-A1-R1_Chr5-2g07740 protein.
    
 0.596
SUS1
Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]
    
 0.596
Your Current Organism:
Microbotryum saponariae
NCBI taxonomy Id: 289078
Other names: M. saponariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.