STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI43243.1Amino acid ABC transporter membrane protein 1, PAAT family. (231 aa)    
Predicted Functional Partners:
SFJ10609.1
L-cystine-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.990
SFI43256.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 
0.983
SFI43231.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 0.980
SFI43217.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.973
SFJ31824.1
L-arginine ABC transporter ATP-binding protein.
 
 0.938
SFI42357.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 0.904
SFJ31799.1
L-arginine ABC transporter membrane protein.
 
 
0.899
SFJ31766.1
L-arginine-binding protein /L-ornithine-binding protein.
 0.880
SFI93388.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 0.866
SFJ24666.1
Polar amino acid transport system ATP-binding protein.
  
 0.830
Your Current Organism:
Pseudomonas argentinensis
NCBI taxonomy Id: 289370
Other names: CCUG 50743, CECT 7010, LMG 22563, LMG:22563, P. argentinensis, Pseudomonas argentinae, Pseudomonas argentinensis Peix et al. 2005, Pseudomonas sp. M7C2, strain CH01
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