STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI43339.1Phage major capsid protein, P2 family. (339 aa)    
Predicted Functional Partners:
SFI43354.1
Phage small terminase subunit.
 
    0.997
SFI43328.1
Phage capsid scaffolding protein (GPO) serine peptidase.
 
  
 0.995
SFI43299.1
Phage portal protein, PBSX family.
 
  
 0.994
SFI43375.1
Phage head completion protein (GPL).
 
  
 0.994
SFI43314.1
Uncharacterized protein YjcR.
 
  
 0.993
SFI43457.1
P2 phage tail completion protein R (GpR).
 
    0.991
SFI43470.1
Phage virion morphogenesis (putative tail completion) protein.
 
    0.991
SFI43607.1
Phage tail assembly chaperone protein, E, or 41 or 14.
 
    0.989
SFI43399.1
P2-like prophage tail protein X.
 
  
 0.988
SFI43656.1
Hypothetical protein.
 
    0.988
Your Current Organism:
Pseudomonas argentinensis
NCBI taxonomy Id: 289370
Other names: CCUG 50743, CECT 7010, LMG 22563, LMG:22563, P. argentinensis, Pseudomonas argentinae, Pseudomonas argentinensis Peix et al. 2005, Pseudomonas sp. M7C2, strain CH01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.