Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFI30878.1 | SFI34444.1 | SAMN05216602_0622 | SAMN05216602_0862 | Na+/proline symporter. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.992 |
SFI30878.1 | SFI36266.1 | SAMN05216602_0622 | SAMN05216602_0984 | Na+/proline symporter. | Response regulator receiver domain-containing protein. | 0.999 |
SFI30878.1 | SFI43194.1 | SAMN05216602_0622 | SAMN05216602_1429 | Na+/proline symporter. | Signal transduction histidine kinase. | 0.999 |
SFI30878.1 | SFI63223.1 | SAMN05216602_0622 | SAMN05216602_2035 | Na+/proline symporter. | PAS domain S-box-containing protein. | 0.999 |
SFI30878.1 | SFI67062.1 | SAMN05216602_0622 | SAMN05216602_2257 | Na+/proline symporter. | Multi-sensor hybrid histidine kinase. | 0.999 |
SFI30878.1 | SFI69662.1 | SAMN05216602_0622 | SAMN05216602_2392 | Na+/proline symporter. | PAS domain S-box-containing protein. | 0.999 |
SFI30878.1 | SFI71550.1 | SAMN05216602_0622 | SAMN05216602_2490 | Na+/proline symporter. | PAS/PAC sensor signal transduction histidine kinase. | 0.992 |
SFI30878.1 | SFI71615.1 | SAMN05216602_0622 | SAMN05216602_2493 | Na+/proline symporter. | Signal transduction histidine kinase. | 0.999 |
SFI30878.1 | SFJ04844.1 | SAMN05216602_0622 | SAMN05216602_3640 | Na+/proline symporter. | Signal transduction histidine kinase. | 0.991 |
SFI30878.1 | SFJ11084.1 | SAMN05216602_0622 | SAMN05216602_3933 | Na+/proline symporter. | PAS domain S-box-containing protein. | 0.999 |
SFI34444.1 | SFI30878.1 | SAMN05216602_0862 | SAMN05216602_0622 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Na+/proline symporter. | 0.992 |
SFI34444.1 | SFI36266.1 | SAMN05216602_0862 | SAMN05216602_0984 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Response regulator receiver domain-containing protein. | 0.993 |
SFI34444.1 | SFI43194.1 | SAMN05216602_0862 | SAMN05216602_1429 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Signal transduction histidine kinase. | 0.977 |
SFI34444.1 | SFI63223.1 | SAMN05216602_0862 | SAMN05216602_2035 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.994 |
SFI34444.1 | SFI67062.1 | SAMN05216602_0862 | SAMN05216602_2257 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Multi-sensor hybrid histidine kinase. | 0.985 |
SFI34444.1 | SFI69662.1 | SAMN05216602_0862 | SAMN05216602_2392 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.998 |
SFI34444.1 | SFI71550.1 | SAMN05216602_0862 | SAMN05216602_2490 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS/PAC sensor signal transduction histidine kinase. | 0.989 |
SFI34444.1 | SFI71615.1 | SAMN05216602_0862 | SAMN05216602_2493 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Signal transduction histidine kinase. | 0.995 |
SFI34444.1 | SFJ04844.1 | SAMN05216602_0862 | SAMN05216602_3640 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Signal transduction histidine kinase. | 0.970 |
SFI34444.1 | SFJ11084.1 | SAMN05216602_0862 | SAMN05216602_3933 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.995 |
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